hg38TSSdata

Transcription start site (TSS) data for the human genome (hg38).

Usage

hg38TSSdata

Format

A data frame with 47982 rows and 3 variables:

chr

Chromosome name (e.g., "chr1").

TargetGene

Gene name associated with the TSS.

TargetGeneTSS

Position of the TSS.

Source

UCSC RefGene database (https://hgdownload2.soe.ucsc.edu/goldenPath/hg38/bigZips/genes/hg38.refGene.gtf.gz).

Details

This dataset contains transcription start site annotations for the hg38 human genome assembly.

Examples

data(hg38TSSdata)
head(hg38TSSdata)
#>    chr TargetGene TargetGeneTSS
#> 1 chr1    DDX11L1         11874
#> 2 chr1     WASH7P         29370
#> 3 chr1  MIR6859-1         17436
#> 4 chr1  MIR6859-2         17436
#> 5 chr1  MIR6859-3         17436
#> 6 chr1  MIR6859-4         17436