mm10TSSdata

Transcription start site (TSS) data for the mouse genome (mm10).

Usage

mm10TSSdata

Format

A data frame with 31599 rows and 3 variables:

chr

Chromosome name (e.g., "chr1").

TargetGene

Gene name associated with the TSS.

TargetGeneTSS

Position of the TSS.

Source

UCSC RefGene database (https://hgdownload2.soe.ucsc.edu/goldenPath/mm10/bigZips/genes/mm10.refGene.gtf.gz).

Details

This dataset contains transcription start site annotations for the mm10 mouse genome assembly.

Examples

data(mm10TSSdata)
head(mm10TSSdata)
#>     chr    TargetGene TargetGeneTSS
#> 1 chr12        Zc3h14      98746968
#> 2 chr15         Troap      99074973
#> 3  chr3         Clca2     145099106
#> 4 chr16 1810013L24Rik       8830100
#> 5 chr17         Srsf7      80207305
#> 6 chr15        Fignl2     101054399